Hughes, T. P. et al. Coral reefs in the Anthropocene. Nature 546, 82–90 (2017).
Google Scholar
Graham, N. A. J., Jennings, S., MacNeil, M. A., Mouillot, D. & Wilson, S. K. Predicting climate-driven regime shifts versus rebound potential in coral reefs. Nature 518, 94–97 (2015).
Google Scholar
McLeod, E. et al. The future of resilience-based management in coral reef ecosystems. J. Environ. Manage. 233, 291–301 (2019).
Google Scholar
Taljaard, S. et al. Implementing integrated coastal management in a sector-based governance system. Ocean Coast. Manage. 67, 39–53 (2012).
Google Scholar
CBD. Kunming-Montreal Global Biodiversity Framework. In Proc. Conference of Parties to the Convention on Biological Diversity Fifteenth Meeting CBD/COP/15/L.25 (2022).
Tittensor, D. P. et al. Global patterns and predictors of marine biodiversity across taxa. Nature 466, 1098–1101 (2010).
Google Scholar
Kummu, M. et al. Over the hills and further away from coast: global geospatial patterns of human and environment over the 20th–21st centuries. Environ. Res. Lett. 11, 034010 (2016).
Google Scholar
He, Q. & Silliman, B. R. Climate change, human impacts, and coastal ecosystems in the Anthropocene. Curr. Biol. 29, R1021–R1035 (2019).
Google Scholar
Doney, S. C. et al. Climate change impacts on marine ecosystems. Annu. Rev. Mar. Sci. 4, 11–37 (2012).
Google Scholar
Andrew, N. L., Bright, P., de la Rua, L., Teoh, S. J. & Vickers, M. Coastal proximity of populations in 22 Pacific Island countries and territories. PLoS ONE 14, e0223249 (2019).
Google Scholar
MacNeil, M. A. et al. Water quality mediates resilience on the Great Barrier Reef. Nat. Ecol. Evol. 3, 620–627 (2019).
Google Scholar
Oliver, E. C. J. et al. Longer and more frequent marine heatwaves over the past century. Nat. Commun. 9, 1324 (2018).
Google Scholar
Hughes, T. P. et al. Global warming and recurrent mass bleaching of corals. Nature 543, 373–377 (2017).
Google Scholar
Hughes, T. P. et al. Global warming transforms coral reef assemblages. Nature 556, 492–496 (2018).
Google Scholar
Edgar, G. J. et al. Continent-wide declines in shallow reef life over a decade of ocean warming. Nature 615, 858–865 (2023).
Google Scholar
Winter, K. B. et al. Indigenous stewardship through novel approaches to collaborative management in Hawai’i. Ecol. Soc.28, 26 (2023).
Sandin, S. A. et al. Harnessing island–ocean connections to maximize marine benefits of island conservation. Proc. Natl Acad. Sci. USA 119, e2122354119 (2022).
Google Scholar
Halpern, B. S., Lester, S. E. & McLeod, K. L. Placing marine protected areas onto the ecosystem-based management seascape. Proc. Natl Acad. Sci. USA 107, 18312–18317 (2010).
Google Scholar
Marshall, P. A., Schuttenberg, H. Z. & West, J. M. A Reef Manager’s Guide to Coral Bleaching (Great Barrier Reef Marine Park Authority, 2006).
Mumby, P. J., Chaloupka, M., Bozec, Y.-M., Steneck, R. S. & Montero-Serra, I. Revisiting the evidentiary basis for ecological cascades with conservation impacts. Conserv. Lett. 15, e12847 (2022).
Google Scholar
Asner, G. P. et al. Mapped coral mortality and refugia in an archipelago-scale marine heat wave. Proc. Natl Acad. Sci. USA 119, e2123331119 (2022).
Google Scholar
Donovan, M. K. et al. Local conditions magnify coral loss after marine heatwaves. Science 372, 977–980 (2021).
Google Scholar
Baum, J. K. et al. Transformation of coral communities subjected to an unprecedented heatwave is modulated by local disturbance. Sci. Adv. 9, eabq5615 (2023).
Google Scholar
Williams, G. J., Gove, J. M., Eynaud, Y., Zgliczynski, B. J. & Sandin, S. A. Local human impacts decouple natural biophysical relationships on Pacific coral reefs. Ecography 38, 751–761 (2015).
Google Scholar
Smith, J. E. et al. Re-evaluating the health of coral reef communities: baselines and evidence for human impacts across the central Pacific. Proc. R. Soc. B. 283, 20151985 (2016).
Google Scholar
Maire, E. et al. How accessible are coral reefs to people? A global assessment based on travel time. Ecol. Lett. 19, 351–360 (2016).
Google Scholar
Maina, J. et al. Human deforestation outweighs future climate change impacts of sedimentation on coral reefs. Nat. Commun. 4, 1986 (2013).
Google Scholar
Hozumi, A., Hong, P. Y., Kaartvedt, S., Røstad, A. & Jones, B. H. Water quality, seasonality, and trajectory of an aquaculture-wastewater plume in the Red Sea. Aquacult. Environ. Inter. 10, 61–77 (2018).
Google Scholar
Brandl, S. J. et al. Coral reef ecosystem functioning: eight core processes and the role of biodiversity. Front. Ecol. Environ. 17, 445–454 (2019).
Google Scholar
Bellwood, D. R., Hughes, T. P., Folke, C. & Nyström, M. Confronting the coral reef crisis. Nature 429, 827–833 (2004).
Google Scholar
Cinner, J. E. et al. Meeting fisheries, ecosystem function, and biodiversity goals in a human-dominated world. Science 368, 307–311 (2020).
Google Scholar
Bozec, Y.-M., Yakob, L., Bejarano, S. & Mumby, P. J. Reciprocal facilitation and non-linearity maintain habitat engineering on coral reefs. Oikos 122, 428–440 (2013).
Google Scholar
Cinner, J. E., Graham, N. A. J., Huchery, C. & MacNeil, M. A. Global effects of local human population density and distance to markets on the condition of coral reef fisheries. Conserv. Biol. 27, 453–458 (2013).
Google Scholar
Stopa, J. E. et al. Wave energy resources along the Hawaiian Island chain. Renew. Energy 55, 305–321 (2013).
Google Scholar
Skirving, W. et al. CoralTemp and the Coral Reef Watch Coral Bleaching Heat Stress Product Suite version 3.1. Remote Sens. 12, 3856 (2020).
Google Scholar
Glynn, P. W. Coral-reef bleaching – ecological perspectives. Coral Reefs 12, 1–17 (1993).
Google Scholar
Gove, J. M. et al. Near-island biological hotspots in barren ocean basins. Nat. Commun. 7, 10581 (2016).
Google Scholar
Whitney, J. L. et al. Surface slicks are pelagic nurseries for diverse ocean fauna. Sci. Rep. 11, 3197 (2021).
Google Scholar
Grottoli, A. G., Rodrigues, L. J. & Palardy, J. E. Heterotrophic plasticity and resilience in bleached corals. Nature 440, 1186–1189 (2006).
Google Scholar
Wooldridge, S. A. Water quality and coral bleaching thresholds: formalising the linkage for the inshore reefs of the Great Barrier Reef, Australia. Mar. Pollut. Bull. 58, 745–751 (2009).
Google Scholar
Fabricius, K. E. Effects of terrestrial runoff on the ecology of corals and coral reefs: review and synthesis. Mar. Pollut. Bull. 50, 125–146 (2005).
Google Scholar
Nalley, E. M. et al. Water quality thresholds for coastal contaminant impacts on corals: a systematic review and meta-analysis. Sci. Total Environ. 794, 148632 (2021).
Google Scholar
Carlson, R. R., Li, J., Crowder, L. B. & Asner, G. P. Large-scale effects of turbidity on coral bleaching in the Hawaiian islands. Front. Mar. Sci. 9, 969472 (2022).
Carlson, R. R., Foo, S. A., Burns, J. H. R. & Asner, G. P. Untapped policy avenues to protect coral reef ecosystems. Proc. Natl Acad. Sci. USA 119, e2117562119 (2022).
Google Scholar
Shantz, A. A. et al. Positive interactions between corals and damselfish increase coral resistance to temperature stress. Glob. Change Biol. 29, 417–431 (2023).
Google Scholar
Vargas-Ángel, B. et al. El Niño-associated catastrophic coral mortality at Jarvis Island, central Equatorial Pacific. Coral Reefs 38, 731–741 (2019).
Google Scholar
Gilmour, J. P., Smith, L. D., Heyward, A. J., Baird, A. H. & Pratchett, M. S. Recovery of an isolated coral reef system following severe disturbance. Science 340, 69–71 (2013).
Google Scholar
Tuholske, C. et al. Mapping global inputs and impacts from of human sewage in coastal ecosystems. PLoS ONE 16, e0258898 (2021).
Google Scholar
Mezzacapo, M. et al. Review article: Hawai’i’s cesspool problem: review and recommendations for water resources and human health. J. Cont. Wat. Res. Ed. 170, 35–75 (2020).
Meyer, C. G., Papastamatiou, Y. P. & Clark, T. B. Differential movement patterns and site fidelity among trophic groups of reef fishes in a Hawaiian marine protected area. Mar. Biol. 157, 1499–1511 (2010).
Google Scholar
Cinner, J. E. & Kittinger, J. N. in Ecology of Fishes on Coral Reefs (ed. Mora, C.) 215–220 (Cambridge Univ. Press, 2015).
van Hooidonk, R. et al. Local-scale projections of coral reef futures and implications of the Paris Agreement. Sci. Rep. 6, 39666 (2016).
Google Scholar
Dinerstein, E. et al. A global deal for nature: guiding principles, milestones, and targets. Sci. Adv. 5, eaaw2869 (2019).
Google Scholar
Obura, D. O. et al. Achieving a nature- and people-positive future. One Earth 6, 105–117 (2023).
Google Scholar
Jokiel, P. L., Brown, E. K., Friedlander, A., Rodgers, S. K. U. & Smith, W. R. Hawai’i coral reef assessment and monitoring program: spatial patterns and temporal dynamics in reef coral communities. Pac. Sci. 58, 159–174 (2004).
Google Scholar
Donovan, M. K. et al. Combining fish and benthic communities into multiple regimes reveals complex reef dynamics. Sci. Rep. 8, 16943 (2018).
Google Scholar
McClanahan, T. R. et al. Prioritizing key resilience indicators to support coral reef management in a changing climate. PLoS ONE 7, e42884 (2012).
Google Scholar
Cinner, J. E. et al. Bright spots among the world’s coral reefs. Nature 535, 416–419 (2016).
Google Scholar
Cinner, J. E. et al. Gravity of human impacts mediates coral reef conservation gains. Proc. Natl Acad. Sci. USA 115, E6116–E6125 (2018).
Google Scholar
Kittinger, J. N. et al. From reef to table: social and ecological factors affecting coral reef fisheries, artisanal seafood supply chains, and seafood security. PLoS ONE 10, e0123856 (2015).
Google Scholar
Grafeld, S., Oleson, K. L. L., Teneva, L. & Kittinger, J. N. Follow that fish: uncovering the hidden blue economy in coral reef fisheries. PLoS ONE 12, e0182104 (2017).
Google Scholar
Delaney, D. G. et al. Patterns in artisanal coral reef fisheries revealed through local monitoring efforts. PeerJ 5, e4089 (2017).
Google Scholar
Heenan, A. & Williams, I. D. Monitoring herbivorous fishes as indicators of coral reef resilience in American Samoa. PLoS ONE 8, e79604 (2013).
Google Scholar
Green, A. L. & Bellwood, D. R. Monitoring Functional Groups of Herbivorous Reef Fishes as Indicators of Coral Reef Resilience: A Practical Guide for Coral Reef Managers in the Asia Pacific Region (IUCN, 2009).
Froese, R. & Pauly, D. FishBase: a global information system on fishes. FishBase www.fishbase.org (2002).
CIESIN. Gridded population of the World, version 4 (GPWv4). NASA Socioeconomic Data and Applications Center (SEDAC) (2016).
Whittier, R. B. & El-Kadi, A. I. Human Health and Environmental Risk of Onsite Sewage Disposal Systems for the Hawaiian Islands of Kauai, Maui, Molokai, and Hawaii (Hawaii Department of Health, 2014).
Delevaux, J. M. S. et al. A linked land-sea modeling framework to inform ridge-to-reef management in high oceanic islands. PLoS ONE 13, e0193230 (2018).
Google Scholar
GCSAA. Nutrient Use and Management Practices on U.S. Golf Courses. Golf Course Environmental Profile Volume II (GCSAA, 2016).
Brosnan, J. T. & Deputy, J. Bermudagrass. Turf Management (2008).
Kunimatsu, T., Sudo, M. & Kawachi, T. Loading rates of nutrients discharging from a golf course and a neighboring forested basin. Water Sci. Technol. 39, 99–107 (1999).
Google Scholar
Wong, J. W. C., Chan, C. W. Y. & Cheung, K. C. Nitrogen and phosphorus leaching from fertilizer applied on golf course: lysimeter study. Water, Air, Soil Pollut. 107, 335–345 (1998).
Google Scholar
Shuman, L. M. Phosphate and nitrate movement through simulated golf greens. Water, Air, Soil Pollut. 129, 305–318 (2001).
Google Scholar
Rea, A. & Skinner, K. D. Geospatial datasets for watershed delineation and characterization used in the Hawai’i StreamStats web application. US Geol. Surv. Data Ser. 680, 12 (2012).
Longman, R. J. et al. Compilation of climate data from heterogeneous networks across the Hawaiian Islands. Sci. Data 5, 180012 (2018).
Google Scholar
Longman, R. J., Newman, A. J., Giambelluca, T. W. & Lucas, M. Characterizing the uncertainty and assessing the value of gap-filled daily rainfall data in Hawai’i. J. Appl. Met. Clim. 59, 1261–1276 (2020).
Google Scholar
Sharp, R. et al. InVEST Version 3.2.0 User’s Guide (The Natural Capital Project, The Nature Conservancy and World Wildlife Fund, 2015).
Hamel, P., Chaplin-Kramer, R., Sim, S. & Mueller, C. A new approach to modeling the sediment retention service (InVEST 3.0): case study of the Cape Fear catchment, North Carolina, USA. Sci. Total Environ. 524–525, 166–177 (2015).
Google Scholar
Falinski, K. A. Predicting Sediment Export into Tropical Coastal Ecosystems to Support Ridge to Reef Management. Thesis, Univ. Hawai’i at Manoa (2016).
Wedding, L. M. et al. Advancing the integration of spatial data to map human and natural drivers on coral reefs. PLoS ONE 13, e0189792 (2018).
Google Scholar
Natural Resources Conservation Service. National Engineering Handbook–Part 630 Hydrology Ch. 10 (US Department of Agriculture, 2004).
Glysson, G. D. Sediment-Tansport Curves Report No. 87–218 (USGS, 1987).
Gove, J. M. et al. Quantifying climatological ranges and anomalies for Pacific coral reef ecosystems. PLoS ONE 8, e61974 (2013).
Google Scholar
Gove, J. M. et al. Coral reef benthic regimes exhibit non-linear threshold responses to natural physical drivers. Mar. Ecol. Prog. Ser. 522, 33–48 (2015).
Google Scholar
Tolman, H. L. A mosaic approach to wind wave modeling. Ocean Model. Online 25, 35–47 (2008).
Google Scholar
Booij, N., Ris, R. C. & Holthuijsen, L. H. A third-generation wave model for coastal regions: 1. model description and validation. J. Geophys. Res. (Oceans) 104, 7649–7666 (1999).
Google Scholar
Li, N. et al. Thirty-four years of Hawai’i wave hindcast from downscaling of climate forecast system reanalysis. Ocean Model. Online 100, 78–95 (2016).
Google Scholar
Graham, N. A. J. et al. Changing role of coral reef marine reserves in a warming climate. Nat. Commun. 11, 2000 (2020).
Google Scholar
Anderson, M., Gorley, R. N. & Clarke, R. K. Permanova+ for Primer: Guide to Software and Statistical Methods (Primer-E Limited, 2008).
Anderson, M. J. & Willis, T. J. Canonical analysis of principal coordinates: a useful method of constrained ordination for ecology. Ecology 84, 511–525 (2003).
Google Scholar
Côté, I. M., Gill, J. A., Gardner, T. A. & Watkinson, A. R. Measuring coral reef decline through meta-analyses. Philos. Trans. R. Soc. Ser. B: Biol. Sci. 360, 385–395 (2005).
Google Scholar
Graham, N. A. J. et al. Climate warming, marine protected areas and the ocean-scale integrity of coral reef ecosystems. PLoS ONE 3, e3039 (2008).
Google Scholar
Wood, S., Scheipl, F. & Wood, M. S. Package ‘gamm4’. Am. Stat. 45, 0.2–5 (2017).
R Core Team. MuMln: Multi-Model Inference R package v.1.13.4 (R Foundation for Statistical Computing, 2015).
Hurvich, C. M. & Tsai, C.-L. Regression and time series model selection in small samples. Biometrika 76, 297–307 (1989).
Google Scholar
Safaie, A. et al. High frequency temperature variability reduces the risk of coral bleaching. Nat. Commun. 9, 1671 (2018).
Google Scholar
Brant, R. Assessing proportionality in the proportional odds model for ordinal logistic regression. Biometrics 46, 1171–1178 (1990).
Google Scholar
McFadden, D. Conditional Logit Analysis of Qualitative Choice Behavior (Academic Press, 1974).
Burnham, K. P. & Anderson, D. R. (eds) Model selection and multimodel inference. A practical information-theoretic approach (Springer, 1998).
Richards, S. A. Testing ecological theory using the information-theoretical approach: examples and cautionary results. Ecology 86, 2805–2814 (2005).
Google Scholar
Individual Wastewater System Database (Hawai’i Department of Health, 2017).
Underground Injection Control Permit Application Files (Hawai’i Department of Health, 2017).
R Core Team. R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing (2021).
Clarke, K. & Gorley, R. Getting started with PRIMER v.7. PRIMER-E: Plymouth (Plymouth Marine Laboratory, 2015).
Beyer, H. L. et al. Risk-sensitive planning for conserving coral reefs under rapid climate change. Conserv. Lett. 11, e12587 (2018).
Google Scholar
Darling, E. S. et al. Social–environmental drivers inform strategic management of coral reefs in the Anthropocene. Nat. Ecol. Evol. 3, 1341–1350 (2019).
Google Scholar
Andrello, M. et al. A global map of human pressures on tropical coral reefs. Conserv. Lett. 15, e12858 (2022).
Google Scholar
Adam, T. C., Burkepile, D. E., Ruttenberg, B. I. & Paddack, M. J. Herbivory and the resilience of Caribbean coral reefs: knowledge gaps and implications for management. Mar. Ecol. Prog. Ser. 520, 1–20 (2015).
Google Scholar
Williams, I. D. et al. Human, oceanographic and habitat drivers of Central and Western Pacific coral reef fish assemblages. PLoS ONE 10, e0120516 (2015).
Google Scholar
Johnson, J. V., Dick, J. T. A. & Pincheira-Donoso, D. Local anthropogenic stress does not exacerbate coral bleaching under global climate change. Global Ecol. Biogeogr. 31, 1228–1236 (2022).
Google Scholar
Wear, S. L. & Thurber, R. V. Sewage pollution: mitigation is key for coral reef stewardship. Ann. N. Y. Acad. Sci. 1355, 15–30 (2015).
Google Scholar
Jokiel, P. L., Hunter, C. L., Taguchi, S. & Watarai, L. Ecological impact of a fresh-water ‘reef kill’ in Kaneohe Bay, Oahu, Hawai’i. Coral Reefs 12, 177–184 (1993).
Google Scholar
Rodgers, Ku. S. et al. Impact to coral reef populations at Hā‘ena and Pila‘a, Kaua‘i, following a record 2018 freshwater flood event. Diversity 13, 66 (2021).
Google Scholar
Dollar, S. J. Wave stress and coral community structure in Hawai’i. Coral Reefs 1, 71–81 (1982).
Google Scholar
Storlazzi, C. D., Brown, E. K., Field, M. E., Rodgers, K. & Jokiel, P. L. A model for wave control on coral breakage and species distribution in the Hawaiian Islands. Coral Reefs 24, 43–55 (2005).
Google Scholar
Chassot, E. et al. Global marine primary production constrains fisheries catches. Ecol. Lett. 13, 495–505 (2010).
Google Scholar
Duarte, C. & Cebrian, J. The fate of marine autotrophic production. Limnol. Oceanogr. 41, 1758–1766 (1996).
Google Scholar
Weis, V. M. Cellular mechanisms of Cnidarian bleaching: stress causes the collapse of symbiosis. J. Exp. Biol. 211, 3059–3066 (2008).
Google Scholar
Gonzalez-Espinosa, P. C. & Donner, S. D. Cloudiness reduces the bleaching response of coral reefs exposed to heat stress. Glob. Change Biol. 27, 3474–3486 (2021).
Google Scholar
MacNeil, M. A. et al. Recovery potential of the world’s coral reef fishes. Nature 520, 341–344 (2015).
Google Scholar
